CDS

Accession Number TCMCG057C39151
gbkey CDS
Protein Id XP_018445788.1
Location join(4486974..4487878,4488206..4488410,4488534..4488685,4488774..4489041,4489303..4489455,4489553..4489756,4489841..4489953,4490074..4490188,4490348..4490437,4490525..4490728,4490810..4490905,4490987..4491109,4491194..4491286,4491373..4491537,4491635..4491724,4491836..4492012)
Gene LOC108817562
GeneID 108817562
Organism Raphanus sativus

Protein

Length 1050aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018590286.1
Definition PREDICTED: probable ubiquitin conjugation factor E4 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category O
Description ubiquitin conjugation factor E4
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko04121        [VIEW IN KEGG]
KEGG_ko ko:K10596        [VIEW IN KEGG]
ko:K10597        [VIEW IN KEGG]
EC 2.3.2.27        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko04120        [VIEW IN KEGG]
ko04141        [VIEW IN KEGG]
map04120        [VIEW IN KEGG]
map04141        [VIEW IN KEGG]
GOs GO:0000209        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004842        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006508        [VIEW IN EMBL-EBI]
GO:0006511        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010243        [VIEW IN EMBL-EBI]
GO:0010498        [VIEW IN EMBL-EBI]
GO:0016567        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019787        [VIEW IN EMBL-EBI]
GO:0019941        [VIEW IN EMBL-EBI]
GO:0030163        [VIEW IN EMBL-EBI]
GO:0030433        [VIEW IN EMBL-EBI]
GO:0032446        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034450        [VIEW IN EMBL-EBI]
GO:0034976        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0036503        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043161        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043632        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044257        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051603        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0061630        [VIEW IN EMBL-EBI]
GO:0061659        [VIEW IN EMBL-EBI]
GO:0070647        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901565        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]
GO:1901698        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCGACGACTCAGAAGCCCCAAAGATCTCCAACCGAAATCGAGGACATAATCCTCCGCAAGATCTTCCACGTAACCCTAACCGAACCCGCCGCCGATGCCTCCTCCGATCCCCGAGTCGTCTACCTCGAGATGACAGCCGCCGAGATTCTCAGCGAAGGCAAAGACGACCTCCTCCTTTCCCGCGATCTCATCGAGAGAGTCCTCATCGACCGTCTCTCCACCGCAAACAACAACAACAACAACTCCCCCTCCGCCTCCGCCGCCGAGCCGCCTTTCCCGTACCTCGTCGGCTGCTACCGCCGAGCCTACGACGAGTCGAAGAAGATCCAGTCGATGAAGGACAGGAACCTGAGGTCGGAGATGGAGGTCGTCACCAGGGACGCGAGGAGGCTCGCTGTTTCCTACTCCAGGATCCACCTGGCGAATCCTGATTTGTTCGGGGGATCGGATGATGATAACAACACCAGGAAGGCCAAGAAGACGAGGAGGAACGCCTCTCCTCTGCTTCCGTTGATCTTCTCAGAGGTCGGTTCTGGTTCGTTGGATATGTTCGGAGGTAGTGGTAGTAGCAGTGTTCAGTCTCCTCCTGGTTTTTTGGATGAGTTCTTCAAGGACTCGGATTTCGATAACTTGGATTTGATTCTCAAGGAGTTGTACGAGGATTTGAGGTCTTCGGTTATTAACGTCTCTGTGCTCGGAGACTTCCAGCCGCCGTTGAGGGCGCTTAAGTATCTTGTTAGCTTGCCTGTTGGAGCTAAATCTCTTGTTAGTCATGAGTGGTGGGTCCCGCGTGGGGCTTATATGAACGGGAGAGCTATGGAGCTGACCAGCATTCTCGGCCCTTTCTTCCATATTAGCGCCCTCCCTGATAACACTCTCTTCAAGAGTCAACCTGATGTTGGGCAGCAGTGTTTCTCTGGAGCATCGGAACGTCGTCCTGCAGATTTATTATCATCCTTCTCTACAATCAAAAACTTTATGAATATTTTGTACAGTGGGCTGCATGATGTACTGATGATATTACTTAAAAGTACCGATACACGTGAGTGTGTTCTACAGTTTCTTTCTGAAGTGATCAATGCAAATGCTTCGAGGGCCCATATACAGGTTGATCCAATTTCTTGTGCTAGCTCAGGCATGTTTTGTAACCTCAGCGCAGTCATGCTCCGGCTCTGTGAACCATTTTTGGACCCGCATTTCACTAAAAGGGATAAGATCGATCCAAAATATGCATTCTCTGGGCATCGCTTGAAATTAAGCGACTTGACTGCTCTCCATGCTTCATCCGAGGAAGTTTCTGAGTGGATTGACAAGGATAACACGGCAAAAGCAAATGACGCTGGAAACGGGAATGAAAGTCGCTTGTTACAATCCAAAGAAGCCACAAGTTCAAGTAGTAATACTTCTCGGCAGAATGCAAAGTCAACAACTAAATACACTTTCATTTGTGAATGCTTCTTTATGACTGCAAGGGTCCTCAATTTGGGTCTCTTAAAAGCACTCTCGGACTTTAAACATCTTTCTCAGGACATCTCGAGAGGTGAAGACAATCTTGCAACATTAAAAGCCATGAGAGATCAAGCACCCTCTCCACAGTTAGAACTTGACATAACCAGAATGGAAAAAGAATTAGAGCTGTATTCTCAGGAAAAGCTTTGCCACGAGGCTCAAATATTAAGGGATGGAGACTTTATCCAGAGAGCTATCTCTTTCTATCGATTAGTCATTGTTTGGTTAGTTGGACTTGTTGGTGGCTTTAAGATGCCTTTACCTTCAACTTGCCTCATGGAATTCTCCTGTATGCCGGAGCATTTTGTTGAAGATGCGATGGAGTTACTGATATTTGCTTCAAGAATTCCCAGAGCGTTGGATGGAGTGCTGTTGGACGACTTTATGAACTTCATCATAATGTTCATGGCAAGTCCAGAATATATTAGAAACCCGTATCTCAGAGCAAAGATGGTTGAAGTTCTGAACTGCTGGATGCCACGCTCAAGTGGTTCTTCTGCTACATCTACTCTCTTTGAAGGACATCAGTTATCGCTTGAGTATCTTGTCAGGAATTTACTGAAACTATATGTTGACATTGAGTTCACGGGTTCTCACACTCAGTTCTATGACAAGTTCAACATTCGCCACAACATTGCCGAGCTTCTAGAGTATCTCTGGCAGGTGCCTAGTCACCGAAATGCGTGGAGAAGGATTGCAAAAGAGGAAGAGAAAGGCGTTTACTTGAACTTCTTAAACTTCTTAGTCAATGATAGCATTTTTCTTCTGGATGAAAGTCTTAACAAAATTCTCGAGATTAAACAAATAGAGGCAGAGATGTCAAATACTGCAGAGTGGGAACAGAGACCAGCGCAAGAGAGACAAGATAGAACGAGACTCTTCCATTCTCAGGAGAATATTGTTAGAATTGACATGAAGCTGGCTAATGAGGATGTGACCATGCTTGCATTTACATCTGAGGAGATCACAGCCCCATTTCTACTCCCTGAGATGGTTGAGAGGGTTGCCAATATGCTTAATTACTTCTTGTTGCAACTCGTGGGTCCACAGCGTAAGTCTTTAAGCTTGAAAGATCCAGAGAAGTACGAGTTCCGTCCAAGACAGTTGCTTAAACAGATTATTCGTATATATGTTAATCTGGCAAGAGGAGACTCGGAAAACATATTCCCCGGTGCCATATCCAGTGATGGACGATCATATAACGAACAGCTATTCGACGCAGGAGCAGATGTTCTTAGGAAAATAGGCGAAGATGGAAGAATCATTCAAGAGTTTATGGAGTTGGGCACAAAGGCCAAAGCTGCTGCCTCCGAAGCTATGGATGCTGAAGCTGCACTTGGTGAAATACCAGATGAGTTCCTCGACCCAATTCAGTGCACGCTAATGAGAGATCCGGTGATACTCCCAAGCTCAAAAACCACAGTTGATCGAGCCATCATTCAACGTCATCTTCTTAGTGACAATCACGACCCGTTTAACCGGGCACATTTGACATCGGATATGTTAATACCTGACATCGAGTTGAAAGCGAGAATCGACGAGTTTGTGAGGTCCCATCAGTCTAAGAAGCGATCAAGTGGAGAAGATAGCAGCAACAAGGAAAGGATACAGACTACAAGCAGTGATATGTTAATCGATTAG
Protein:  
MSTTQKPQRSPTEIEDIILRKIFHVTLTEPAADASSDPRVVYLEMTAAEILSEGKDDLLLSRDLIERVLIDRLSTANNNNNNSPSASAAEPPFPYLVGCYRRAYDESKKIQSMKDRNLRSEMEVVTRDARRLAVSYSRIHLANPDLFGGSDDDNNTRKAKKTRRNASPLLPLIFSEVGSGSLDMFGGSGSSSVQSPPGFLDEFFKDSDFDNLDLILKELYEDLRSSVINVSVLGDFQPPLRALKYLVSLPVGAKSLVSHEWWVPRGAYMNGRAMELTSILGPFFHISALPDNTLFKSQPDVGQQCFSGASERRPADLLSSFSTIKNFMNILYSGLHDVLMILLKSTDTRECVLQFLSEVINANASRAHIQVDPISCASSGMFCNLSAVMLRLCEPFLDPHFTKRDKIDPKYAFSGHRLKLSDLTALHASSEEVSEWIDKDNTAKANDAGNGNESRLLQSKEATSSSSNTSRQNAKSTTKYTFICECFFMTARVLNLGLLKALSDFKHLSQDISRGEDNLATLKAMRDQAPSPQLELDITRMEKELELYSQEKLCHEAQILRDGDFIQRAISFYRLVIVWLVGLVGGFKMPLPSTCLMEFSCMPEHFVEDAMELLIFASRIPRALDGVLLDDFMNFIIMFMASPEYIRNPYLRAKMVEVLNCWMPRSSGSSATSTLFEGHQLSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRRIAKEEEKGVYLNFLNFLVNDSIFLLDESLNKILEIKQIEAEMSNTAEWEQRPAQERQDRTRLFHSQENIVRIDMKLANEDVTMLAFTSEEITAPFLLPEMVERVANMLNYFLLQLVGPQRKSLSLKDPEKYEFRPRQLLKQIIRIYVNLARGDSENIFPGAISSDGRSYNEQLFDAGADVLRKIGEDGRIIQEFMELGTKAKAAASEAMDAEAALGEIPDEFLDPIQCTLMRDPVILPSSKTTVDRAIIQRHLLSDNHDPFNRAHLTSDMLIPDIELKARIDEFVRSHQSKKRSSGEDSSNKERIQTTSSDMLID